Creates, Merges, and Reads Binary Dosage Files

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Documentation for package ‘BinaryDosage’ version 1.0.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

bdapply	Apply a function to each SNP in a binary dosage file
bdmerge	Merge binary dosage files together
genapply	Apply a function to each SNP in a gen, impute2, file
gentobd	Convert a gen file to a binary dosage file
getaaf	Calculate alternate allele frequency
getbdinfo	Get information about a binary dosage file
getgeninfo	Get information about a gen, impute2, file
getmaf	Calculate minor allele frequency
getrsq	Calculate imputation r squared
getsnp	Read SNP data from a binary dosage file
getvcfinfo	Get information about a vcf file
vcfapply	Apply a function to each SNP in a vcf file
vcftobd	Convert a VCF file to a binary dosage file