Last updated on 2024-05-03 05:53:17 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.1 | 11.22 | 111.07 | 122.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2.1 | 7.92 | 80.88 | 88.80 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2.1 | 154.46 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.1 | 157.03 | OK | |||
| r-devel-windows-x86_64 | 1.2.1 | 12.00 | 92.00 | 104.00 | OK | |
| r-patched-linux-x86_64 | 1.2.1 | 10.98 | 102.89 | 113.87 | OK | |
| r-release-linux-x86_64 | 1.2.1 | 6.06 | 105.44 | 111.50 | OK | |
| r-release-macos-arm64 | 1.2.1 | 49.00 | OK | |||
| r-release-windows-x86_64 | 1.2.1 | 9.00 | 78.00 | 87.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.2.1 | 49.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.2.1 | 75.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.2.1 | 13.00 | 110.00 | 123.00 | OK |
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in 'qtl2pattern-Ex.R' failed
The error most likely occurred in:
> ### Name: gene_exon
> ### Title: Get exons for set of genes
> ### Aliases: gene_exon summary.gene_exon subset.gene_exon ggplot_gene_exon
> ### autoplot.gene_exon
> ### Keywords: hplot utilities
>
> ### ** Examples
>
> dirpath <- "https://raw.githubusercontent.com/rqtl/qtl2data/master/DOex"
>
> # Read DOex example cross from 'qtl2data'
> DOex <- subset(qtl2::read_cross2(file.path(dirpath, "DOex.zip")), chr = "2")
Warning in utils::download.file(file, tmpfile, quiet = TRUE) :
URL 'https://raw.githubusercontent.com/rqtl/qtl2data/master/DOex/DOex.zip': status was 'SSL connect error'
Error in utils::download.file(file, tmpfile, quiet = TRUE) :
cannot open URL 'https://raw.githubusercontent.com/rqtl/qtl2data/master/DOex/DOex.zip'
Calls: subset -> <Anonymous> -> <Anonymous>
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'qtl2pattern.Rmd' using rmarkdown
Quitting from lines at lines 58-62 [unnamed-chunk-3] (qtl2pattern.Rmd)
Error: processing vignette 'qtl2pattern.Rmd' failed with diagnostics:
cannot open URL 'https://raw.githubusercontent.com/rqtl/qtl2data/master/DOex/DOex.zip'
--- failed re-building 'qtl2pattern.Rmd'
SUMMARY: processing the following file failed:
'qtl2pattern.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64