vhica: Vertical and Horizontal Inheritance Consistence Analysis

The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) <doi:10.1093/molbev/msv341>. The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.

Version:	0.2.8
Suggests:	ape, plotrix, parallel, seqinr, gtools
Published:	2023-03-08
Author:	Arnaud Le Rouzic
Maintainer:	Arnaud Le Rouzic <arnaud.le-rouzic at universite-paris-saclay.fr>
License:	GPL-2
NeedsCompilation:	no
Materials:	README
In views:	Omics
CRAN checks:	vhica results

Documentation:

Reference manual:

vhica.pdf

Downloads:

Package source:	vhica_0.2.8.tar.gz
Windows binaries:	r-prerel: vhica_0.2.8.zip, r-release: vhica_0.2.8.zip, r-oldrel: vhica_0.2.8.zip
macOS binaries:	r-prerel (arm64): vhica_0.2.8.tgz, r-release (arm64): vhica_0.2.8.tgz, r-oldrel (arm64): vhica_0.2.8.tgz, r-prerel (x86_64): vhica_0.2.8.tgz, r-release (x86_64): vhica_0.2.8.tgz
Old sources:	vhica archive

Linking:

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