Enum TranscriptSupportLevel

  • All Implemented Interfaces:
    java.io.Serializable, java.lang.Comparable<TranscriptSupportLevel>

    public enum TranscriptSupportLevel
    extends java.lang.Enum<TranscriptSupportLevel>
    Transcript level support Reference: http://useast.ensembl.org/Help/Glossary?id=492;redirect=no
    Author:
    pcingola
    • Enum Constant Summary

      Enum Constants 
      Enum Constant Description
      TSL_1  
      TSL_2  
      TSL_3  
      TSL_4  
      TSL_5  
      TSL_NA
      The transcript was not analyzed for one of the following reasons: pseudo-gene annotation, including transcribed pseudo-genes human leukocyte antigen (HLA) transcript immunoglobin gene transcript T-cell receptor transcript single-exon transcript (will be included in a future version)
    • Field Summary

      Fields 
      Modifier and Type Field Description
      static int TSL_NULL_VALUE  
    • Method Summary

      All Methods Static Methods Concrete Methods 
      Modifier and Type Method Description
      static TranscriptSupportLevel parse​(java.lang.String str)  
      static int tsl​(TranscriptSupportLevel tsl)
      Return TSL level (-1 if not available / invalid)
      static TranscriptSupportLevel valueOf​(java.lang.String name)
      Returns the enum constant of this type with the specified name.
      static TranscriptSupportLevel[] values()
      Returns an array containing the constants of this enum type, in the order they are declared.
      • Methods inherited from class java.lang.Enum

        clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
      • Methods inherited from class java.lang.Object

        getClass, notify, notifyAll, wait, wait, wait
    • Method Detail

      • values

        public static TranscriptSupportLevel[] values()
        Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:
        for (TranscriptSupportLevel c : TranscriptSupportLevel.values())
            System.out.println(c);
        
        Returns:
        an array containing the constants of this enum type, in the order they are declared
      • valueOf

        public static TranscriptSupportLevel valueOf​(java.lang.String name)
        Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
        Parameters:
        name - the name of the enum constant to be returned.
        Returns:
        the enum constant with the specified name
        Throws:
        java.lang.IllegalArgumentException - if this enum type has no constant with the specified name
        java.lang.NullPointerException - if the argument is null
      • tsl

        public static int tsl​(TranscriptSupportLevel tsl)
        Return TSL level (-1 if not available / invalid)