Uses of Class
org.snpeff.fileIterator.RegulationFileIterator
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Packages that use RegulationFileIterator Package Description org.snpeff org.snpeff.fileIterator -
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Uses of RegulationFileIterator in org.snpeff
Methods in org.snpeff with parameters of type RegulationFileIterator Modifier and Type Method Description void
RegulationFileConsensus. readFile(RegulationFileIterator regulationFileIterator)
Read a file and add all regulation intervalsvoid
RegulationFileSplitBytType. splitFile(RegulationFileIterator regulationFileIterator, java.lang.String path)
Read a regulation file and split into one file for each "regulation type" -
Uses of RegulationFileIterator in org.snpeff.fileIterator
Subclasses of RegulationFileIterator in org.snpeff.fileIterator Modifier and Type Class Description class
RegulationBedFileIterator
Opens a GFF3 file and create regulatory elements.class
RegulationGffFileIterator
Opens a GFF3 file and create regulatory elements.
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