Class Gff3FileIterator

  • All Implemented Interfaces:
    java.lang.Iterable<GffMarker>, java.util.Iterator<GffMarker>

    public class Gff3FileIterator
    extends MarkerFileIterator<GffMarker>
    Opens a sequence change file and iterates over all intervals in GFF3 format.
    Author:
    pcingola
    • Constructor Detail

      • Gff3FileIterator

        public Gff3FileIterator​(java.lang.String fileName)
      • Gff3FileIterator

        public Gff3FileIterator​(java.lang.String fileName,
                                Genome genome)
      • Gff3FileIterator

        public Gff3FileIterator​(java.lang.String fileName,
                                Genome genome,
                                int inOffset)