Package org.snpeff.nextProt
Class LocationTargetIsoformInteraction
- java.lang.Object
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- org.snpeff.nextProt.Location
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- org.snpeff.nextProt.LocationTargetIsoform
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- org.snpeff.nextProt.LocationTargetIsoformInteraction
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public class LocationTargetIsoformInteraction extends LocationTargetIsoform
A location respect to two locations within an isoform In this case "start" and "end" are not really an interval, but an interaction between two locations (e.g. disulphide bond)
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Constructor Summary
Constructors Constructor Description LocationTargetIsoformInteraction(java.lang.String accession, int begin, int end)
LocationTargetIsoformInteraction(LocationTargetIsoform loc)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
isInteraction()
java.lang.String
toString()
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Methods inherited from class org.snpeff.nextProt.LocationTargetIsoform
isIsoform
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Constructor Detail
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LocationTargetIsoformInteraction
public LocationTargetIsoformInteraction(LocationTargetIsoform loc)
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LocationTargetIsoformInteraction
public LocationTargetIsoformInteraction(java.lang.String accession, int begin, int end)
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Method Detail
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isInteraction
public boolean isInteraction()
- Overrides:
isInteraction
in classLocation
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toString
public java.lang.String toString()
- Overrides:
toString
in classLocationTargetIsoform
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