# Bayesian Ammi Model for Continuous Data with or without Additive and Dominance Effect

## Documentation for package ‘ammiBayes’ version 2.2-0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

AMMI | AMMI algorithm
ammiBayes | Bayesian Ammi Model for Continuous Data with or without additive and dominance effect
ammiBayes.conf.plot | Plot ammiBayes object with confidence region
ammiBayes.gen.plot | Plot genotype effects from ammiBayes object
ammiBayes.mean.plot | Plot ammiBayes object
ammiBayes.sm.plot | Plot Method for Bayesian Stability Mahalanobis Distance (SM_i)
ammiData | Dataset for example
ammiDominance | Example dataset for running the AMMI, AMMIGBlup, and AMMIGBlupD models.
AMMIGBlup | AMMIGBlup algorithm
AMMIGBlupD | AMMIGBlupD algorithm
detect.interaction | Detect GxE interaction
diagnosis.ammiBayes | Bayesian AMMI for ordinal data
gen.effects | Bayesian AMMI for continous data
predict.ammiBayes | Bayesian AMMI for continuous data
sm.index | Bayesian Stability Mahalanobis Distance Index
summary.ammiBayes | Summary Method for ammiBayes object