Semi-Parametric Joint Modeling of Longitudinal and Survival Data

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Documentation for package ‘FastJM’ version 1.7.2

• DESCRIPTION file.
• Package NEWS.

Help Pages

cdata	Simulated competing risks data correlated with ydata
cdatah	Simulated competing risks data where event hazards depend on within-subject variance
coef	Extract parameter estimates from fitted joint models
coef.jmcs	Extract parameter estimates from fitted joint models
coef.JMMLSM	Extract parameter estimates from fitted joint models
coef.mvjmcs	Extract parameter estimates from fitted joint models
combine_biomarkers	Combine biomarker measurements across multiple data frames
Concordance	Concordance for joint models
DynPredAcc	Dynamic prediction accuracy metrics for joint models
fitted	Fitted values for joint models
fitted.jmcs	Fitted values for joint models
fixef	Extract fixed effects estimates from joint models
jmcs	Joint modeling of longitudinal continuous data and competing risks
jmcs_control	Control options for jmcs
JMMLSM	Joint modeling of longitudinal means, within-subject variability, and survival
JMMLSM_control	Control options for JMMLSM
logLik	Extract log-likelihoods from fitted joint models
logLik.jmcs	Extract log-likelihoods from fitted joint models
logLik.JMMLSM	Extract log-likelihoods from fitted joint models
logLik.mvjmcs	Extract log-likelihoods from fitted joint models
mvcdata	Simulated competing risks data correlated with mvydata
mvjmcs	Joint modeling of multivariate longitudinal and competing risks data
mvjmcs_control	Control options for mvjmcs
mvydata	Simulated bivariate longitudinal data
plot.jmcs	Diagnostic plots for fitted jmcs models
plot.survfit	Plot dynamic predictions from joint models
plot.survfitjmcs	Plot dynamic predictions from joint models
plot.survfitJMMLSM	Plot dynamic predictions from joint models
plot.survfitmvjmcs	Plot dynamic predictions from joint models
print	Print fitted joint models
print.jmcs	Print fitted joint models
print.JMMLSM	Print fitted joint models
print.mvjmcs	Print fitted joint models
print.survfit	Print dynamic predictions from joint models
print.survfitjmcs	Print dynamic predictions from joint models
print.survfitJMMLSM	Print dynamic predictions from joint models
print.survfitmvjmcs	Print dynamic predictions from joint models
ranef	Random effects estimates for joint models
residuals	Residuals for joint models
residuals.jmcs	Residuals for joint models
simJMdata	Simulate single-biomarker joint model data
simJMWSVdata	Simulate joint model data with heterogeneous within-subject variability
simmvJMdata	Simulate multivariate longitudinal and competing risks data
simmvJMdatalm	Data simulation for multivariate joint models conditional on a landmark time
summary	Summarize fitted joint models
summary.Concordance	Summarize concordance estimates
summary.DynPredAcc	Summarize dynamic prediction accuracy
summary.jmcs	Summarize fitted joint models
summary.JMMLSM	Summarize fitted joint models
summary.mvjmcs	Summarize fitted joint models
survfitJM	Dynamic predictions from fitted joint models
survfitJM.jmcs	Dynamic predictions from fitted joint models
survfitJM.JMMLSM	Dynamic predictions from fitted joint models
survfitJM.mvjmcs	Dynamic predictions from fitted joint models
timeplot	Diagnostic plots for the fitted joint model
vcov	Extract variance-covariance matrices from fitted joint models
vcov.jmcs	Extract variance-covariance matrices from fitted joint models
vcov.JMMLSM	Extract variance-covariance matrices from fitted joint models
vcov.mvjmcs	Extract variance-covariance matrices from fitted joint models
ydata	Simulated longitudinal data
ydatah	Simulated longitudinal data with within-subject variance