Package: imuGAP
Title: Immunity: Geographic and Age-Based Projection
Version: 0.2.0
Authors@R: 
    c(person("Carl", "Pearson", email = "carl.ab.pearson@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0003-0701-7860")),
      person("Claire Perrin", "Smith", role = "aut",
           comment = c(ORCID = "0000-0003-1069-9460")),
      person("Kelly", "Zhen", email = "zhen717605@gmail.com", role = "ctb"),
      person("Weston", "Voglesonger", email = "westonvogle@gmail.com", role = "ctb"),
      person("Joshua", "Chen", email = "joshuazchen1@gmail.com", role = "ctb"),
      person("Minjae", "Kung", email = "minjaekung@gmail.com", role = "ctb"))
Description: Fits Bayesian hierarchical models of vaccine
    coverage by location, birth cohort, and age. Observations 
    of vaccination status (which may span cohorts, ages, and doses) are
    used to fit a latent survival-style process model that decomposes
    coverage into a lifetime propensity to vaccinate and a
    time-varying force of vaccination. Hierarchical spatial structure 
    (e.g., state, county, school) supports partial pooling via random
    effects. Models are implemented in 'Stan' and fit via 'rstan'.
    Provides helpers to validate user-supplied input data, and to predict 
    coverage from fitted models.
License: MIT + file LICENSE
Encoding: UTF-8
Language: en-US
Biarch: true
Depends: R (>= 4.1.0)
Imports: data.table, flexstanr (>= 0.2.0), methods, Rcpp (>= 1.1.2),
        RcppParallel (>= 5.1.11.2), rstan (>= 2.32), rstantools (>=
        2.6.0)
LinkingTo: BH (>= 1.90), Rcpp (>= 1.1.2), RcppEigen (>= 0.3.4),
        RcppParallel (>= 5.1.11), rstan (>= 2.32), StanHeaders (>=
        2.32)
SystemRequirements: GNU make
Config/Needs/check: stan-dev/cmdstanr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), roxygen2, roxyglobals,
        lintr, spelling, bayesplot, ggplot2, withr, pkgload, thematic,
        usethis
VignetteBuilder: knitr
Config/testthat/edition: 3
URL: https://accidda.github.io/imuGAP/,
        https://github.com/ACCIDDA/imuGAP
BugReports: https://github.com/ACCIDDA/imuGAP/issues
LazyData: true
LazyDataCompression: xz
Config/roxyglobals/filename: globals.R
Config/roxyglobals/unique: FALSE
Config/roxygen2/version: 8.1.0
NeedsCompilation: yes
Packaged: 2026-09-02 14:59:29 UTC; runner
Author: Carl Pearson [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-0701-7860>),
  Claire Perrin Smith [aut] (ORCID:
    <https://orcid.org/0000-0003-1069-9460>),
  Kelly Zhen [ctb],
  Weston Voglesonger [ctb],
  Joshua Chen [ctb],
  Minjae Kung [ctb]
Maintainer: Carl Pearson <carl.ab.pearson@gmail.com>
Repository: CRAN
Date/Publication: 2026-09-02 15:30:14 UTC
Built: R 4.5.2; x86_64-apple-darwin20; 2026-09-02 17:03:02 UTC; unix
Archs: imuGAP.so.dSYM
