S7 Data Structures for Diffusion MRI Tractography
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Documentation for package ‘fiber’ version 0.1.2
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| add_shape_descriptors | Adds shape descriptors to a streamline or bundle |
| add_shape_descriptors-fiber-bundle-method | 'add_shape_descriptors()' method for 'bundle' objects |
| add_shape_descriptors-fiber-streamline-method | 'add_shape_descriptors()' method for 'streamline' objects |
| add_shape_descriptors-method | 'add_shape_descriptors()' method for 'bundle' objects |
| add_shape_descriptors-method | 'add_shape_descriptors()' method for 'streamline' objects |
| as_bundle | Coerce an object to a bundle |
| as_bundle-fiber-bundle-method | 'as_bundle()' method for 'bundle' objects |
| as_bundle-fiber-streamline-method | 'as_bundle()' method for 'streamline' objects |
| as_bundle-method | 'as_bundle()' method for 'bundle' objects |
| as_bundle-method | 'as_bundle()' method for 'streamline' objects |
| as_bundle_set | Coerce an object to a bundle_set |
| as_dwifiber | Coerce a streamline or bundle to a 'dwiFiber' object |
| as_dwifiber-fiber-bundle-method | 'as_dwifiber()' method for 'bundle' objects |
| as_dwifiber-fiber-streamline-method | 'as_dwifiber()' method for 'streamline' objects |
| as_dwifiber-method | 'as_dwifiber()' method for 'bundle' objects |
| as_dwifiber-method | 'as_dwifiber()' method for 'streamline' objects |
| as_streamline | Coerce an object to a streamline |
| as_streamline-fiber-bundle-method | 'as_streamline()' method for 'bundle' objects |
| as_streamline-fiber-streamline-method | 'as_streamline()' method for 'streamline' objects |
| as_streamline-method | 'as_streamline()' method for 'bundle' objects |
| as_streamline-method | 'as_streamline()' method for 'streamline' objects |
| bind_bundles | Combine streamlines and/or bundles into a single bundle |
| bind_bundle_sets | Combine bundles and/or bundle_sets into a single bundle_set |
| bundle | Bundle S7 class |
| bundle_set | Bundle set S7 class |
| compute_hausdorff_distance | Computes the Hausdorff distance between streamlines |
| compute_hausdorff_distance-fiber-bundle-method | 'compute_hausdorff_distance()' method for 'bundle' objects |
| compute_hausdorff_distance-fiber-streamline-method | 'compute_hausdorff_distance()' method for two 'streamline' objects |
| compute_hausdorff_distance-method | 'compute_hausdorff_distance()' catch-all method |
| compute_hausdorff_distance-method | 'compute_hausdorff_distance()' method for 'bundle' objects |
| compute_hausdorff_distance-method | 'compute_hausdorff_distance()' method for two 'streamline' objects |
| get_curvature | Curvature of a streamline |
| get_curvilinear_length | Curvilinear length of a streamline |
| get_euclidean_length | Euclidean length of a streamline |
| get_sinuosity | Sinuosity of a streamline |
| get_torsion | Torsion of a streamline |
| is_bundle | Test whether an object is a bundle |
| is_bundle_set | Test whether an object is a bundle_set |
| is_streamline | Test whether an object is a streamline |
| reparametrize | Reparametrize a streamline or bundle onto a uniform arc-length grid |
| reparametrize-fiber-bundle-method | 'reparametrize()' method for 'bundle' objects |
| reparametrize-fiber-streamline-method | 'reparametrize()' method for 'streamline' objects |
| reparametrize-method | 'reparametrize()' method for 'bundle' objects |
| reparametrize-method | 'reparametrize()' method for 'streamline' objects |
| streamline | Streamline S7 class |