Supporting Functions for Packages Maintained by 'YuLab-SMU'
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Documentation for package ‘yulab.utils’ version 0.2.3
Help Pages
| auto_set_regexpr_style | Switch regular expression style (PCRE vs TRE) |
| Biocpkg | Markdown link to CRAN/Bioconductor |
| c2 | c2 |
| cache_list_items | Cache intermediate data |
| cache_load | Cache intermediate data |
| cache_save | Cache intermediate data |
| cache_size | Cache intermediate data |
| check_directory | Check if directory exists and is accessible |
| check_file | Handle file operations with proper error messages |
| check_input | Validate input with type/length constraints |
| check_packages | Check if required packages are installed with informative errors |
| check_pkg | Check if required packages are installed with informative errors |
| check_range | Check if value is within specified range |
| combinations | combinations |
| CRANpkg | Markdown link to CRAN/Bioconductor |
| download_yulab_file | Process YuLab File Download |
| exec | exec |
| get_cache | Cache intermediate data |
| get_cache_element | Cache intermediate data |
| get_cache_item | Cache intermediate data |
| get_dependencies | get_dependencies |
| get_fun_from_pkg | get_fun_from_pkg |
| Githubpkg | Markdown link to GitHub |
| has_internet | has_internet |
| initial_cache | Cache intermediate data |
| initial_cache_item | Cache intermediate data |
| install_zip | install_zip |
| install_zip_gh | install_zip_gh |
| is.installed | is.installed |
| load_OrgDb | load_OrgDb |
| ls2df | Convert a list of vectors (e.g., gene IDs) to 'data.frame' |
| mat2df | mat2df |
| mat2list | mat2list |
| mypkg | mypkg |
| o | o |
| packageTitle | packageTitle |
| parse_ratio | parse_ratio |
| pload | pload |
| prune_cache_item | Cache intermediate data |
| quiet | quiet |
| rbindlist | rbindlist |
| read.cb | read.cb |
| rm_cache | Cache intermediate data |
| rm_cache_item | Cache intermediate data |
| scale_range | scale-range |
| scihub_dl | download publication via scihub |
| set_PCRE | Switch regular expression style (PCRE vs TRE) |
| set_regexpr_style | Switch regular expression style (PCRE vs TRE) |
| set_TRE | Switch regular expression style (PCRE vs TRE) |
| show_in_excel | show_in_excel |
| str_detect | str_detect |
| str_ends | str_starts |
| str_extract | str_extract |
| str_starts | str_starts |
| str_wrap | str_wrap |
| update_cache_item | Cache intermediate data |
| user_dir | user_dir |
| use_perl | Switch regular expression style (PCRE vs TRE) |
| with_cache | Cache intermediate data |
| yread | yread |
| yread_tsv | yread |
| yulab_abort | Standardized error handling |
| yulab_inform | Standardized error handling |
| yulab_msg | yulab_msg |
| yulab_warn | Standardized error handling |