# Unified Differential Expression, Variability and Skewness Analysis for RNA-Seq Data

## Documentation for package ‘SIEVEseq’ version 0.0.0

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

clr.SN.fit | Fit the skew-normal distribution to CLR-transformed RNA-Seq data
clrCounts1 | Simulated CLR-transformed count table
clrCounts2 | Simulated DV genes CLR-transformed count table
clrCounts3 | Simulated DE genes CLR-transformed count table
clrDE | Differential Expression (DE) Test of CLR-transformed RNA-Seq Data
clrDV | Differential variability (DV) test of CLR-transformed RNA-Seq data
clrSeq | Fit the skew-normal model to CLR-transformed RNA-Seq data for 2 groups
clrSIEVE | Simultaneous Differential Expression, Variability and Skewness Analysis Using RNA-Seq Data
SN.plot | Distribution of CLR-transformed counts
violin.plot.SIEVE | Violin plots