ribiosUtils-package	ribiosUtils-package
allIdentical	allIdentical
apply1	summarizeRows
apply2	summarizeRows
applyTopOrIncAndNotExclFilter	applyTopOrIncAndNotExclFilter
asNumMatrix	asNumMatrix
assertColumnName	assertColumnName
assertContrast	assertContrast
assertDesign	assertDesign
assertDesignContrast	assertDesignContrast
assertDir	isDir
assertFile	checkFile
atofMatrix	asNumMatrix
basefilename	extname
bedaInfo	bedaInfo
biomicsPstorePath2URL	biomicsPstorePath2URL
bound	bound
boundNorm	bound
cbindByRownames	cbindByRownames
checkDir	isDir
checkFile	checkFile
chosenFew	chosenFew
clearLog	registerLog
closeLoggerConnections	closeLoggerConnections
columnOverlapCoefficient	columnOverlapCoefficient
compTwoVecs	compTwoVecs
corByRownames	corByRownames
countTokens	countTokens
createDir	createDir
cumJaccardDistance	cumJaccardIndex
cumJaccardIndex	cumJaccardIndex
cumOverlapCoefficient	cumOverlapCoefficient
cumOverlapDistance	cumOverlapCoefficient
cumsumprop	cumsumprop
cutInterval	cutInterval
cutreeIntoOrderedGroups	cutreeIntoOrderedGroups
dfFactor	dfFactor
dfFactor2Str	dfFactor2Str
doLog	writeLog
equateWellLabelWidth	equateWellLabelWidth
extname	extname
firstUp	firstUp
fixWidthStr	fixWidthStr
flushLog	registerLog
haltifnot	haltifnot
headhead	headhead
headtail	headtail
identicalMatrix	identicalMatrix
identicalMatrixValue	identicalMatrixValue
imatch	imatch
imatchv	imatch
invertList	invertList
ipmatch	imatch
ipmatchv	imatch
isDebugging	setDebug
isDir	isDir
isError	isError
isEven	isOdd
isIntDebugging	setDebug
isInvarCol	removeInvarCol
isMaxStatRow	keepMaxStatRow
isOdd	isOdd
isRocheCompoundID	isRocheCompoundID
isTopOrIncAndNotExcl	isTopOrIncAndNotExcl
isVarCol	removeInvarCol
jaccardDistance	jaccardIndex
jaccardIndex	jaccardIndex
keepMaxStatRow	keepMaxStatRow
keepMaxStatRowInd	keepMaxStatRow
lastChar	lastChar
libordie	libordie
list2df	list2df
listOverlapCoefficient	listOverlapCoefficient
longdf2matrix	longdf2matrix
matchColumn	matchColumn
matchColumnIndex	matchColumn
matchColumnName	matchColumnName
matchv	imatch
matrix2longdf	matrix2longdf
mergeInfreqLevelsByCumsumprop	mergeInfreqLevelsByCumsumprop
midentical	midentical
mintersect	munion
mmatch	mmatch
mset	munion
msetdiff	munion
munion	munion
na.false	na.false
naivePairwiseDist	naivePairwiseDist
nField	countTokens
ofactor	ofactor
orderCutgroup	orderCutgroup
overlapCoefficient	overlapCoefficient
overlapDistance	overlapCoefficient
overwriteDir	overwriteDir
pAbsLog10Score	pAbsLog10Score
pairwiseJaccardDistance	pairwiseJaccardIndex
pairwiseJaccardIndex	pairwiseJaccardIndex
pairwiseOverlapCoefficient	pairwiseOverlapDistance
pairwiseOverlapDistance	pairwiseOverlapDistance
percentage	percentage
pQnormScore	pQnormScore
print.BEDAinfo	print.BEDAinfo
pScore	pScore
putColsFirst	putColsFirst
pwdecode	pwdecode
pwencode	pwencode
qqmsg	qqmsg
qsystem	qsystem
rbindByColnames	cbindByRownames
refactorNum	refactorNum
registerLog	registerLog
relevels	relevels
relevelsByNamedVec	relevelsByNamedVec
relevelsByNotNamedVec	relevelsByNotNamedVec
reload	reload
removeColumns	removeColumns
removeColumnsByFunc	removeColumnsByFunc
removeColumnsWithNA	removeColumnsWithNA
removeInvarCol	removeInvarCol
removeRowsByFunc	removeColumnsByFunc
removeRowsWithNA	removeRowsWithNA
replaceColumnName	replaceColumnName
replaceZeroPvalue	replaceZeroPvalue
ribiosTempdir	ribiosTempdir
ribiosTempfile	ribiosTempfile
ribiosUtils	ribiosUtils
rmat	rmat
rocheCore	rocheCore
rowscale	rowscale
rowscale.matrix	rowscale.matrix
rowscale.table	rowscale.table
rrank	rrank
rrank.default	rrank
rrank.matrix	rrank.matrix
rrankInd	rrankInd
rsetdiff	rsetdiff
scriptInit	scriptInit
setDebug	setDebug
shortenRocheCompoundID	shortenRocheCompoundID
shortenStr	shortenStr
silencio	silencio
sortAndFilterByCumsumprop	sortAndFilterByCumsumprop
sortByCol	sortByCol
sortByDimnames	sortByDimnames
stringDataFrame2numericMatrix	asNumMatrix
strtoken	strtoken
stubborngc	stubborngc
subsetByColumnName	subsetByColumnName
summarizeCols	summarizeRows
summarizeColumns	summarizeRows
summarizeRows	summarizeRows
tailtail	headhead
trim	trim
ulen	uniqueLength
uniqueLength	uniqueLength
uniqueNonNA	uniqueNonNA
unsetDebug	setDebug
verbose	verbose
wellIndex2position	wellIndex2position
whoami	whoami
writeLog	writeLog
