CRAN Package Check Results for Package dartR.captive

Last updated on 2024-12-25 05:48:32 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.75 16.41 139.70 156.11 NOTE
r-devel-linux-x86_64-debian-gcc 0.75 12.78 100.62 113.40 NOTE
r-devel-linux-x86_64-fedora-clang 0.75 271.39 OK
r-devel-linux-x86_64-fedora-gcc 0.75 247.07 OK
r-devel-windows-x86_64 0.75 19.00 142.00 161.00 NOTE
r-patched-linux-x86_64 0.75 24.29 133.41 157.70 OK
r-release-linux-x86_64 0.75 16.83 133.60 150.43 OK
r-release-macos-arm64 0.75 61.00 OK
r-release-macos-x86_64 0.75 91.00 OK
r-release-windows-x86_64 0.75 20.00 0.00 20.00 FAIL
r-oldrel-macos-arm64 0.75 70.00 OK
r-oldrel-macos-x86_64 0.75 148.00 OK
r-oldrel-windows-x86_64 0.75 23.00 176.00 199.00 OK

Additional issues

clang-ASAN gcc-ASAN

Check Details

Version: 0.75
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: gl.filter.parent.offspring.Rd: gl.report.rdepth, gl.report.reproducibility gl.report.parent.offspring.Rd: gl.report.rdepth, gl.report.reproducibility Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 0.75
Check: PDF version of manual
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > ### ** Examples > > require("dartR.data") > res <- utils.assignment_2(platypus.gl, unknown = "T27") Starting utils.assignment_2 Processing genlight object with SNP data Warning: data include loci that are scored NA across all individuals. Consider filtering using gl <- gl.filter.allna(gl) Assigning individual T27 against population SEVERN_ABOVE Assigning individual T27 against population SEVERN_BELOW Assigning individual T27 against population TENTERFIELD Completed: utils.assignment_2 > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 15.21 1.19 16.41 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-release-windows-x86_64