Last updated on 2025-12-16 05:50:23 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 220.22 | 230.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 184.00 | 194.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 245.00 | 256.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 238.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.039, elapsed: 2.007 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.476, system: 0.096, elapsed: 12.199 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.015, elapsed: 0.331 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.935, system: 0.231, elapsed: 5.227 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.304 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.869, system: 0.410, elapsed: 20.756 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.612, system: 0.057, elapsed: 2.230 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.759, system: 0.299, elapsed: 14.355 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.018, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.170, system: 0.287, elapsed: 5.971 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.008, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.488, system: 0.705, elapsed: 24.014 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.784, system: 0.078, elapsed: 2.546 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.903, system: 0.345, elapsed: 15.377 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.018, elapsed: 0.312 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.091, system: 0.271, elapsed: 6.479 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.016, elapsed: 0.243 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.271, system: 0.290, elapsed: 1.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.090, system: 1.062, elapsed: 27.030 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.810, system: 0.101, elapsed: 2.396 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.549, system: 0.304, elapsed: 10.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.276 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.313, system: 0.362, elapsed: 6.082 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.014, elapsed: 0.284 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.825, system: 0.605, elapsed: 23.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.550, system: 1.451, elapsed: 44.178 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/154s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.036, elapsed: 2.803 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.505, system: 0.070, elapsed: 18.357 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.013, elapsed: 0.536 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.746, system: 0.185, elapsed: 7.175 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.008, elapsed: 0.367 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.779, system: 0.337, elapsed: 30.317 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.043, elapsed: 3.682 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.518, system: 0.095, elapsed: 16.727 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.273 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.839, system: 0.188, elapsed: 5.888 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.925, system: 0.370, elapsed: 27.775 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.570, system: 0.031, elapsed: 2.275 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.515, system: 0.098, elapsed: 16.910 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.012, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.753, system: 0.162, elapsed: 6.420 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.005, elapsed: 0.344 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.088, system: 0.257, elapsed: 1.299 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.971, system: 0.593, elapsed: 28.609 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.600, system: 0.033, elapsed: 3.188 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.072, elapsed: 19.558 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.364 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.786, system: 0.183, elapsed: 7.510 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.380 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.850, system: 0.491, elapsed: 25.412 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.831, system: 0.819, elapsed: 57.838 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64