Last updated on 2025-12-20 23:48:41 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.26 | 243.16 | 256.42 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.23 | 204.40 | 214.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 186.00 | 208.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.29 | 246.27 | 261.56 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 244.00 | 255.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 263.00 | 273.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 235.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/184s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.791, system: 0.112, elapsed: 3.026 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.908, system: 0.428, elapsed: 20.064 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.028, elapsed: 0.754 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.024, system: 0.283, elapsed: 12.281 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.008, elapsed: 0.533 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.679, system: 0.904, elapsed: 38.140 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.773, system: 0.088, elapsed: 5.273 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.723, system: 0.332, elapsed: 32.266 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.020, elapsed: 0.594 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.142, system: 0.248, elapsed: 10.502 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.007, elapsed: 0.435 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.611, system: 0.758, elapsed: 50.910 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.051, elapsed: 3.112 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.749, system: 0.306, elapsed: 18.576 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.016, elapsed: 0.475 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.971, system: 0.224, elapsed: 8.085 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.249, system: 0.270, elapsed: 1.561 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.605, system: 0.924, elapsed: 33.449 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.054, elapsed: 2.961 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.525, system: 0.139, elapsed: 17.101 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.017, elapsed: 0.412 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.028, system: 0.230, elapsed: 8.066 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.005, elapsed: 0.270 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.983, system: 0.653, elapsed: 21.577 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.242, system: 1.126, elapsed: 51.591 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/187s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.782, system: 0.091, elapsed: 4.763 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.240, elapsed: 25.959 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.022, elapsed: 0.549 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.820, system: 0.252, elapsed: 10.163 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.011, elapsed: 0.432 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.216, system: 0.653, elapsed: 43.321 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.042, elapsed: 3.708 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.676, system: 0.188, elapsed: 21.009 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.016, elapsed: 0.527 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.902, system: 0.234, elapsed: 9.333 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.398 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.094, system: 0.523, elapsed: 36.364 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.037, elapsed: 3.228 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.651, system: 0.157, elapsed: 23.311 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.022, elapsed: 0.534 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.883, system: 0.262, elapsed: 10.027 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.477 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.125, system: 0.286, elapsed: 1.779 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.330, system: 1.007, elapsed: 41.496 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.040, elapsed: 4.169 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.712, system: 0.181, elapsed: 18.693 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.018, elapsed: 0.470 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.024, system: 0.292, elapsed: 9.117 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.325 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.033, system: 0.770, elapsed: 19.340 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.455, system: 1.346, elapsed: 53.610 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64