CRAN Package Check Results for Package qtl2

Last updated on 2026-07-22 05:51:51 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.44 590.46 230.47 820.93 NOTE
r-devel-linux-x86_64-debian-gcc 0.44 439.45 162.69 602.14 NOTE
r-devel-linux-x86_64-fedora-clang 0.46 780.00 351.04 1131.04 OK
r-devel-linux-x86_64-fedora-gcc 0.46 487.00 140.98 627.98 OK
r-devel-windows-x86_64 0.46 540.00 279.00 819.00 OK
r-patched-linux-x86_64 0.44 565.78 233.32 799.10 OK
r-release-linux-x86_64 0.44 597.99 232.86 830.85 OK
r-release-macos-arm64 0.46 116.00 -36.00 80.00 OK
r-release-macos-x86_64 0.46 346.00 245.00 591.00 OK
r-release-windows-x86_64 0.44 639.00 304.00 943.00 OK
r-oldrel-macos-arm64 0.46 87.00 -10.00 77.00 OK
r-oldrel-macos-x86_64 0.46 350.00 224.00 574.00 OK
r-oldrel-windows-x86_64 0.44 743.00 393.00 1136.00 OK

Check Details

Version: 0.44
Check: R code for possible problems
Result: NOTE Found calls to structure() using deprecated special names: qtl2/tests/testthat/test-calc_geno_freq.R (.Dim: 8, .Dimnames: 8, .Names: 2) qtl2/tests/testthat/test-calcerrorlod.R (.Dim: 5, .Dimnames: 5) qtl2/tests/testthat/test-compare_geno.R (.Dim: 3, .Dimnames: 3, .Names: 2) qtl2/tests/testthat/test-compare_maps.R (.Names: 1) qtl2/tests/testthat/test-control_files.R (.Names: 12) qtl2/tests/testthat/test-count_xo.R (.Dim: 2, .Dimnames: 2) qtl2/tests/testthat/test-create_gene_query_func.R (.Names: 1) qtl2/tests/testthat/test-create_variant_query_func.R (.Names: 1) qtl2/tests/testthat/test-est_herit.R (.Names: 1) qtl2/tests/testthat/test-find_index_snp.R (.Names: 1) qtl2/tests/testthat/test-find_peaks.R (.Label: 3, .Names: 3) qtl2/tests/testthat/test-io.R (.Names: 4) qtl2/tests/testthat/test-n_missing.R (.Names: 1) qtl2/tests/testthat/test-reduce_markers.R (.Names: 7) qtl2/tests/testthat/test-scan1_pg.R (.Dim: 2, .Dimnames: 2) qtl2/tests/testthat/test-scan1snps.R (.Dim: 1, .Dimnames: 1) qtl2/tests/testthat/test-simgeno.R (.Dim: 2, .Dimnames: 2) '.Dim' should be changed to 'dim'. '.Dimnames' should be changed to 'dimnames'. '.Names' should be changed to 'names'. '.Label' should be changed to 'levels'. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc