Parentage assignment package. Parentage assignment is performed based on observed average Mendelian transmission probability distributions or Exclusion. The main functions of this package are the function APIS_2n(), APIS_3n() and launch_APIShiny(), which perform parentage assignment.
| Version: | 2.0.8 |
| Depends: | R (≥ 3.5.0), shinyBS |
| Imports: | cowplot, data.table, doParallel, dplyr, DT, foreach, ggplot2, gridExtra, htmltools, methods, plotly, rlang, shiny, shinythemes |
| Published: | 2024-11-04 |
| DOI: | 10.32614/CRAN.package.APIS |
| Author: | Julien Roche [aut, cre], Ronan Griot [aut], Mathieu Besson [aut], François Allal [aut], Marc Vandeputte [aut], Jonathan D'Ambrosio [aut], Romain Morvezen [aut], Florence Phocas [aut], Sophie Brard-Fudulea [aut], Pierrick Haffray [aut] |
| Maintainer: | Julien Roche <julien.roche at inrae.fr> |
| License: | GPL-2 | GPL-3 [expanded from: GPL] |
| NeedsCompilation: | yes |
| CRAN checks: | APIS results |
| Reference manual: | APIS.pdf |
| Package source: | APIS_2.0.8.tar.gz |
| Windows binaries: | r-devel: APIS_2.0.7.zip, r-release: APIS_2.0.7.zip, r-oldrel: APIS_2.0.7.zip |
| macOS binaries: | r-release (arm64): APIS_2.0.8.tgz, r-oldrel (arm64): APIS_2.0.8.tgz, r-release (x86_64): APIS_2.0.8.tgz, r-oldrel (x86_64): APIS_2.0.8.tgz |
| Old sources: | APIS archive |
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