TrenchR: Tools for Microclimate and Biophysical Ecology
Tools for translating environmental change into organismal response. Microclimate models to vertically scale weather station data to organismal heights. The biophysical modeling tools include both general models for heat flows and specific models to predict body temperatures for a variety of ectothermic taxa. Additional functions model and temporally partition air and soil temperatures and solar radiation. Utility functions estimate the organismal and environmental parameters needed for biophysical ecology. 'TrenchR' focuses on relatively simple and modular functions so users can create transparent and flexible biophysical models. Many functions are derived from Gates (1980) <doi:10.1007/978-1-4612-6024-0> and Campbell and Norman (1988) <isbn:9780387949376>.
| Version: | 1.1.1 |
| Depends: | R (≥ 3.3.1) |
| Imports: | deSolve, msm, Rdpack (≥ 0.7), stats, zoo |
| Suggests: | covr, knitr, rmarkdown, testthat |
| Published: | 2023-09-13 |
| DOI: | 10.32614/CRAN.package.TrenchR |
| Author: | Lauren Buckley 
[aut, cre],
Bryan Briones Ortiz [aut],
Isaac Caruso [aut],
Aji John [aut],
Ofir Levy [aut],
Abigail Meyer [aut],
Eric Riddell
[aut],
Yutaro Sakairi [aut],
Juniper Simonis
[aut],
Brian Helmuth
[ctb] |
| Maintainer: | Lauren Buckley <lbuckley at uw.edu> |
| BugReports: | https://github.com/trenchproject/TrenchR/issues |
| License: | MIT + file LICENSE |
| URL: | https://trenchproject.github.io/TrenchR/, https://github.com/trenchproject/TrenchR |
| NeedsCompilation: | no |
| Citation: | TrenchR citation info |
| Materials: | README NEWS |
| CRAN checks: | TrenchR results |
Documentation:
| Reference manual: | TrenchR.pdf |
| Vignettes: |
Allometries and conversions Estimating microclimates List of symbols Using energy balances to estimate body temperatures |
Downloads:
| Package source: | TrenchR_1.1.1.tar.gz |
| Windows binaries: | r-devel: TrenchR_1.1.1.zip, r-release: TrenchR_1.1.1.zip, r-oldrel: TrenchR_1.1.1.zip |
| macOS binaries: | r-release (arm64): TrenchR_1.1.1.tgz, r-oldrel (arm64): TrenchR_1.1.1.tgz, r-release (x86_64): TrenchR_1.1.1.tgz, r-oldrel (x86_64): TrenchR_1.1.1.tgz |
| Old sources: | TrenchR archive |
Linking:
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