Utilities dedicated to the analysis of biological sequences by metric MultiDimensional Scaling with projection of supplementary data. It contains functions for reading multiple sequence alignment files, calculating distance matrices, performing metric multidimensional scaling and visualizing results.
| Version: | 1.2.3 |
| Depends: | R (≥ 3.6.0), amap, e1071, scales, cluster, rgl |
| Published: | 2020-04-07 |
| DOI: | 10.32614/CRAN.package.bios2mds |
| Author: | Julien Pele with Jean-Michel Becu, Rym Ben Boubaker, Herve Abdi, and Marie Chabbert |
| Maintainer: | Marie Chabbert <marie.chabbert at univ-angers.fr> |
| License: | GPL-2 | GPL-3 [expanded from: GPL] |
| NeedsCompilation: | no |
| Materials: | ChangeLog |
| CRAN checks: | bios2mds results |
| Reference manual: | bios2mds.pdf |
| Package source: | bios2mds_1.2.3.tar.gz |
| Windows binaries: | r-devel: bios2mds_1.2.3.zip, r-release: bios2mds_1.2.3.zip, r-oldrel: bios2mds_1.2.3.zip |
| macOS binaries: | r-release (arm64): bios2mds_1.2.3.tgz, r-oldrel (arm64): bios2mds_1.2.3.tgz, r-release (x86_64): bios2mds_1.2.3.tgz, r-oldrel (x86_64): bios2mds_1.2.3.tgz |
| Old sources: | bios2mds archive |
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