Maintainer email updated from djbetancourt@uninorte.edu.co
to fungp.rpack@gmail.com
to ensure a permanet and stable channel of communication with the community.
A couple syntax fixes in the package notation to keep up with recent updates in Roxygen2.
extend
added to the update
method enabling to perform hyperparameter re-estimation, using the previous hyperparameter values stored in the model as starting points for the new optimization.Line type of the mean function in plotSims.fgpm
changed to dashed (lty
= 2) for easier inspection.
The trace
, pbars
and control.optim
arguments were added to update.fgpm
for a wider control of displays.
Convergence code and negated log-likelihood value added as slots of fgpm objects to make them more informative.
Forwarding of optim()
control
argument enabled in fgpm through control.optim
.
Following the addition of control.optim, we improved the functionality of the fgpm
and fgpm_factory
arguments to control the display of funGp
native progress messages
The trace
, pbars
and control.optim
arguments were added to modelDef
for a wider control of displays.
Pre-existent future backend registers protected as suggested by the author of future in issue #14
Pre-existent foreach adapters registers protected as suggested by the author of future in issue #15
The summary
method has been added for Xfgpm
and fgpm
objects.
New classes "predict.Xfgpm"
and "simulate.Xfgpm"
.
All plotters are now plot
methods for the classes "Xfgpm"
, "fgpm"
, "predict.Xfgpm"
or "simulate.Xfgpm"
.
New functions modelDef
and [[
to refit a fgpm
object from a Xfgpm
one.
format4pred()
removed and replaced by get_active_in()
as anticipated in 0.2.0 release.Own rm_between()
function implemented to remove dependency on the qdapRegex
package.
Minor change to resolve a %dopar%
issue during parallelized processes based on %dorng%
.
check
issue evoked by CRAN.check
NOTE
related to the declaration in Imports
of the plyr
package.Fixed incoherence between the sorting order of the list of explored models and their performance statistic, stored at the xm@log.success@sols
and xm@log.success@fitness
slots of the Xfgpm
object delivered by fgpm_factory()
. Now the models in xm@log.success@sols
are correctly sorted in decreasing order by performance.
Resolved bug causing crash in fgpm_factory()
during structural optimization with only functional inputs, e.g., for the call fgpm_factory(fIn = fIn, sOut = sOut)
. Thanks to Jérémy Rohmer for pointing out the bug.
Resolved bug causing crash in fgpm_factory()
during structural optimization with only scalar inputs, e.g., for the call fgpm_factory(sIn = sIn, sOut = sOut)
.
Improved display of progress bars for fgpm()
and fgpm_factory()
.
Improved placing of the legend in plotX()
to prevent hiding important information.
format4pred()
deprecated for get_active_in()
.