vignette("hydroloom")
and
vignette("advanced_network")
talks about the basics of
network topology representation and attributes that build on a strictly
dendritic network. This vignette expands those topics by describing
hydroloom
functionality that supports non-dendritic
networks.
Non-dendritic networks represent downstream diverted flow where one
path is primary and all others are thought to be secondary. The
following attributes are supported by hydroloom
to help
track and work with this primary and secondary downstream
categorization.
The attributes fromnode
and tonode
are used
to store a flow network as a edge node topology where every network
feature has one and only one node upstream and one and only one node
downstream. Nodes are useful if converting a flow network to a graph and
are useful in many analysis contexts as there is a single identifier for
a confluence or divergence.
The divergence
attribute indicates if a downstream
connection is primary (1) or secondary (2). If 0, a connection is not
downstream of a divergence. This attribute is useful as it facilitates
following a flow network in the “downstream mainstem” direction at every
divergence.
The return divergence
attribute indicates that one or
more of the features upstream of a given feature originates from a
divergence. If 0, the upstream features are not part of a diversion. If
1, one or more of the upstream features is part of a diversion.
The stream calculator
attribute is part of the modified
Strahler stream order as implemented in the NHDPlus data model. It
indicates if a given feature is part of the downstream mainstem
dendritic network or is part of a diverted path. If 0, the path is part
of a diversion. Otherwise stream calculator
will be equal
to stream order. When generating Strahler stream order, if stream
calculator is 0 for a given feature, that feature is not considered for
incrementing downstream stream order.
As a system, stream calculator
, divergence
and return divergence
support network navigation and
processing in the context of diverted paths.
divergence
set to 1.stream calculator
set to 0.return diversion
set
to 1.The example below shows how we can recreate the non-dendritic attributes and use them in practice.
We’ll start with the small sample watershed that’s included in
hydroloom
and select only the attributes required to
recreate the non-dendritic network.
x <- sf::read_sf(system.file("extdata/new_hope.gpkg",
package = "hydroloom"))
# First we select only an id, a name, and a feature type.
flow_net <- x |>
select(COMID, GNIS_ID, FTYPE) |>
sf::st_transform(5070)
# Now we convert the geometric network to an attribute topology
# and convert that to a node topology and join our attributes back
flow_net <- flow_net |>
make_attribute_topology(min_distance = 5) |>
hydroloom::make_node_topology(add_div = TRUE) |>
left_join(sf::st_drop_geometry(flow_net), by = "COMID")
# We only have one outlet so it doesn't matter if it is coastal
# or inland but we have to provide it.
outlets <- filter(flow_net, !tonode %in% fromnode)
# We have these feature types. A larger dataset might include
# things like canals which would not be considered "major"
unique(flow_net$FTYPE)
#> [1] "StreamRiver" "Connector" "ArtificialPath"
# now we run the add_divergence, add_toids, and add_streamorder
flow_net <- add_divergence(flow_net,
coastal_outlet_ids = c(),
inland_outlet_ids = outlets$COMID,
name_attr = "GNIS_ID",
type_attr = "FTYPE",
major_types = unique(flow_net$FTYPE)) |>
add_toids() |>
add_streamorder() |>
add_return_divergence()
# Make sure we reproduce what came from our source NHDPlus data.
sum(flow_net$divergence == 2)
#> [1] 84
sum(x$Divergence == 2)
#> [1] 84
all(flow_net$divergence == x$Divergence)
#> [1] TRUE
sum(flow_net$return_divergence == x$RtnDiv)
#> [1] 745
names(flow_net)
#> [1] "COMID" "toid" "tonode"
#> [4] "GNIS_ID" "FTYPE" "divergence"
#> [7] "fromnode" "stream_order" "stream_calculator"
#> [10] "return_divergence"
With the above code, we removed all attributes other than an ID, a
name and a feature type and recreated both a dendritic (toid) and
non-dendritic (fromnode tonode) topology. We added
divergence
attribute, stream_order
,
stream_calculator
, and return_divergence
attributes.