pedbuildr: Pedigree Reconstruction
Reconstruct pedigrees from genotype data, by optimising the likelihood over all possible pedigrees subject to given restrictions. Tailor-made plots facilitate evaluation of the output. This package is part of the 'pedsuite' ecosystem for pedigree analysis. In particular, it imports 'pedprobr' for calculating pedigree likelihoods and 'forrel' for estimating pairwise relatedness.
| Version: | 0.3.0 |
| Depends: | pedtools (≥ 2.2.0), R (≥ 4.1.0) |
| Imports: | forrel (≥ 1.5.0), glue, pedmut, pedprobr, ribd |
| Suggests: | testthat |
| Published: | 2023-08-22 |
| DOI: | 10.32614/CRAN.package.pedbuildr |
| Author: | Magnus Dehli Vigeland
 [aut, cre] |
| Maintainer: | Magnus Dehli Vigeland <m.d.vigeland at medisin.uio.no> |
| BugReports: | https://github.com/magnusdv/pedbuildr/issues |
| License: | GPL-3 |
| URL: | https://github.com/magnusdv/pedbuildr |
| NeedsCompilation: | no |
| Language: | en-GB |
| Citation: | pedbuildr citation info |
| Materials: | README NEWS |
| CRAN checks: | pedbuildr results |
Documentation:
| Reference manual: | pedbuildr.pdf |
Downloads:
| Package source: | pedbuildr_0.3.0.tar.gz |
| Windows binaries: | r-devel: pedbuildr_0.3.0.zip, r-release: pedbuildr_0.3.0.zip, r-oldrel: pedbuildr_0.3.0.zip |
| macOS binaries: | r-release (arm64): pedbuildr_0.3.0.tgz, r-oldrel (arm64): pedbuildr_0.3.0.tgz, r-release (x86_64): pedbuildr_0.3.0.tgz, r-oldrel (x86_64): pedbuildr_0.3.0.tgz |
| Old sources: | pedbuildr archive |
Reverse dependencies:
| Reverse imports: | pedsuite |
Linking:
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