A fast, interactive cross-platform, and easy to share 'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or 'AFNI/SUMA' surfaces. The viewer widget can be either standalone or embedded into 'R-shiny' applications. The standalone version only require a web browser with 'WebGL2' support (for example, 'Chrome', 'Firefox', 'Safari'), and can be inserted into any websites. The 'R-shiny' support allows the 3D viewer to be dynamically generated from reactive user inputs. Please check the publication by Wang, Magnotti, Zhang, and Beauchamp (2023, <doi:10.1523/ENEURO.0328-23.2023>) for electrode localization. This viewer has been fully adopted by 'RAVE' <https://openwetware.org/wiki/RAVE>, an interactive toolbox to analyze 'iEEG' data by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>). Please check 'citation("threeBrain")' for details.
| Version: | 1.2.0 |
| Imports: | utils, grDevices, graphics, dipsaus, xml2, servr, png, knitr, shiny (≥ 1.2.0), digest (≥ 0.6.22), freesurferformats (≥ 0.1.7), jsonlite (≥ 1.5), stringr (≥ 1.3.1), htmlwidgets (≥ 1.3), R6 (≥ 2.3.0), gifti (≥ 0.7.5), oro.nifti (≥ 0.9.1) |
| Suggests: | rmarkdown, DT, ravetools, htmltools |
| Published: | 2024-11-07 |
| DOI: | 10.32614/CRAN.package.threeBrain |
| Author: | Zhengjia Wang [aut, cre, cph], John Magnotti [ctb, res], Xiang Zhang [ctb, res], Brian Metzger [res], Elizabeth Nesbitt [res], Meng Li [ths], Michael Beauchamp [ths, ctb, dtc] |
| Maintainer: | Zhengjia Wang <dipterix.wang at gmail.com> |
| BugReports: | https://github.com/dipterix/threeBrain/issues |
| License: | MPL-2.0 |
| URL: | https://dipterix.org/threeBrain/, https://github.com/dipterix/threeBrain |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | threeBrain citation info |
| Materials: | NEWS |
| CRAN checks: | threeBrain results |
| Reference manual: | threeBrain.pdf |
| Vignettes: |
Getting Started (source, R code) Data Visualization (Electrodes) (source, R code) |
| Package source: | threeBrain_1.2.0.tar.gz |
| Windows binaries: | r-devel: threeBrain_1.2.0.zip, r-release: threeBrain_1.2.0.zip, r-oldrel: threeBrain_1.2.0.zip |
| macOS binaries: | r-release (arm64): threeBrain_1.2.0.tgz, r-oldrel (arm64): threeBrain_1.2.0.tgz, r-release (x86_64): threeBrain_1.2.0.tgz, r-oldrel (x86_64): threeBrain_1.2.0.tgz |
| Old sources: | threeBrain archive |
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